Faculty

Benjamin Glicksberg

Assistant Professor

Bio

Benjamin Glicksberg is an Assistant Professor in the Hasso Plattner Institute for Digital Health within the Genetics and Genomic Sciences Department at the Icahn School of Medicine at Mount Sinai. His work revolves around synthesizing multi-omic health data, such as genomics, Electronic Health Records, biomedical imaging, and sensor data, to forward the ideals of precision medicine. He focuses on overcoming systemic biases of such data to create high-fidelity phenotypes that can be used for more robust machine learning applications. He is a large proponent of reproducibility and has developed open-source tools and packages within the OMOP common data model format. He completed a post-doc at the University of California, San Francisco in the Bakar Computational Health Sciences Institute and received his Ph.D. from the Icahn School of Medicine at Mount Sinai in 2017.

Bio

Benjamin Glicksberg is an Assistant Professor in the Hasso Plattner Institute for Digital Health within the Genetics and Genomic Sciences Department at the Icahn School of Medicine at Mount Sinai. His work revolves around synthesizing multi-omic health data, such as genomics, Electronic Health Records, biomedical imaging, and sensor data, to forward the ideals of precision medicine. He focuses on overcoming systemic biases of such data to create high-fidelity phenotypes that can be used for more robust machine learning applications. He is a large proponent of reproducibility and has developed open-source tools and packages within the OMOP common data model format. He completed a post-doc at the University of California, San Francisco in the Bakar Computational Health Sciences Institute and received his Ph.D. from the Icahn School of Medicine at Mount Sinai in 2017.

Publications

January, 2021

Physiological Data from a Wearable Device Identifies SARS-CoV-2 Infection and Symptoms and Predicts COVID-19 Diagnosis: Observational Study

Journal | Journal of Medical Internet Research

HPI·MS Authors

Robert Hirten

Matteo Danieletto

Micol Zweig

Eddye Golden

Sparshdeep (Shelly) Kaur

Alex Charney

Riccardo Miotto

Benjamin Glicksberg

Erwin Bottinger

Girish Nadkarni

Zahi Fayad

11 HPI•MS authors

Full list of authors

Robert P Hirten; Matteo Danieletto; Lewis Tomalin; Katie Hyewon Choi; Micol Zweig; Eddye Golden; Sparshdeep Kaur; Drew Helmus; Anthony Biello; Renata Pyzik; Alexander Charney; Riccardo Miotto; Benjamin S Glicksberg; Matthew Levin; Ismail Nabeel; Judith Aberg; David Reich; Dennis Charney; Erwin P Bottinger; Laurie Keefer; Mayte Suarez-Farinas; Girish N Nadkarni; Zahi A Fayad

Journal

Journal of Medical Internet Research

Open Publication

November, 2020

Deep Learning for Biomedical Applications

Journal | Machine Learning in Cardiovascular Medicine, Elsevier

HPI·MS Authors

Jessica De Freitas

Benjamin Glicksberg

Kipp Johnson

Riccardo Miotto

4 HPI•MS authors

Full list of authors

Jessica De Freitas, Benjamin S. Glicksberg, Kipp W. Johnson, Riccardo Miotto

Book Chapter

Machine Learning in Cardiovascular Medicine, Elsevier

Open Publication

November, 2020

Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records

Journal | medRxiv

HPI·MS Authors

Jessica De Freitas

Kipp Johnson

Eddye Golden

Girish Nadkarni

Erwin Bottinger

Benjamin Glicksberg

Riccardo Miotto

7 HPI•MS authors

Full list of authors

Jessica K De Freitas, Kipp W Johnson, Eddye Golden, Girish N Nadkarni, Joel T Dudley, Erwin P Bottinger, Benjamin S Glicksberg, Riccardo Miotto

Journal

medRxiv

Open Publication

November, 2020

Machine Learning to Predict Mortality and Critical Events in a Cohort of Patients With COVID-19 in New York City: Model Development and Validation

Journal | JMIR Medical Informatics

HPI·MS Authors

Akhil Vaid

Sulaiman Somani

Adam Russak

Jessica De Freitas

Ishan Paranjpe

Kipp Johnson

Riccardo Miotto

Shan Zhao

Nidhi Naik

Patricia (Savi) Glowe

Eddye Golden

Matteo Danieletto

Manbir Singh

Erwin Bottinger

Jagat Narula

Zahi Fayad

Alex Charney

Benjamin Glicksberg

Girish Nadkarni

19 HPI•MS authors

Full list of authors

Akhil Vaid, Sulaiman Somani, Adam J Russak, Jessica K De Freitas, Fayzan F Chaudhry, Ishan Paranjpe, Kipp W Johnson, Samuel J Lee, Riccardo Miotto, Shan Zhao, Noam Beckmann, Nidhi Naik, Kodi Arfer, Arash Kia, Prem Timsina, Anuradha Lala, Manish Paranjpe, Patricia Glowe, Eddye Golden, Matteo Danieletto, Manbir Singh, Dara Meyer, Paul F O'Reilly, Laura H Huckins, Patricia Kovatch, Joseph Finkelstein, Robert M Freeman, Edgar Argulian, Andrew Kasarskis, Bethany Percha, Judith A Aberg, Emilia Bagiella, Carol R Horowitz, Barbara Murphy, Eric J Nestler, Eric E Schadt, Judy H Cho, Carlos Cordon-Cardo, Valentin Fuster, Dennis S Charney, David L Reich, Erwin P Bottinger, Matthew A Levin, Jagat Narula, Zahi A Fayad, Allan Just, Alexander W Charney, Girish N Nadkarni, Benjamin S Glicksberg

Journal

JMIR Medical Informatics

Open Publication

October, 2020

Hospitalised COVID-19 patients of the Mount Sinai Health System: a retrospective observational study using the electronic medical records

Journal | BMJ Open

HPI·MS Authors

Alex Charney

Girish Nadkarni

Jessica De Freitas

Benjamin Glicksberg

4 HPI•MS authors

Full list of authors

Zichen Wang, Amanda Zheutlin, Yu-Han Kao, Kristin Ayers, Susan Gross, Patricia Kovatch, Sharon Nirenberg, Alexander Charney, Girish Nadkarni, Jessica K De Freitas, Paul O'Reilly, Allan Just, Carol Horowitz, Glenn Martin , Andrea Branch, Benjamin S Glicksber, Dennis Charney, David Reich, William K Oh, Eric Schadt, Rong Chen, Li Li

Journal

BMJ Open

Open Publication

October, 2020

Automated disease cohort selection using word embeddings improves upon electronic phenotyping algorithms

Journal | Symposium on Artificial Intelligence for Learning Health Systems

HPI·MS Authors

Benjamin Glicksberg

Jessica De Freitas

Kipp Johnson

Girish Nadkarni

Riccardo Miotto

5 HPI•MS authors

Full list of authors

Benjamin S. Glicksberg*, Jessica De Freitas*, Kipp W. Johnson, Girish Nadkarni, Joel T. Dudley, and Riccardo Miotto

Conference

Symposium on Artificial Intelligence for Learning Health Systems

Open Publication

October, 2020

Utilization of Deep Learning for Subphenotype Identification in Sepsis-Associated Acute Kidney Injury

Journal | Clinical Journal of the American Society of Nephrology

HPI·MS Authors

Kumardeep Chaudhary

Akhil Vaid

Ishan Paranjpe

Suraj Jaladanki

Kipp Johnson

Pattharanitima Pattharawin

Ross O’Hagan

Benjamin Glicksberg

Erwin Bottinger

Lili Chan

Girish Nadkarni

11 HPI•MS authors

Full list of authors

Kumardeep Chaudhary, Akhil Vaid, Áine Duffy, Ishan Paranjpe, Suraj Jaladanki, Manish Paranjpe, Kipp Johnson, Avantee Gokhale, Pattharawin Pattharanitima, Kinsuk Chauhan, Ross O’Hagan, Tielman Van Vleck, Steven G. Coca, Richard Cooper, Benjamin Glicksberg, Erwin P. Bottinger, Lili Chan and Girish N. Nadkarni

Clinical Journal of the American Society of Nephrology

Open Publication

September, 2020

Exploring the potential for collaborative use of an app-based platform for n-of-1 trials among healthcare professionals that treat patients with insomnia

Journal | Frontierts in Psychiatry

HPI·MS Authors

Jessica De Freitas

Benjamin Glicksberg

2 HPI•MS authors

Full list of authors

Jason R. Bobe, Jessica K. De Freitas, Benjamin S. Glicksberg

Journal

Frontierts in Psychiatry

Open Publication

September, 2020

AKI in Hospitalized Patients with COVID-19

Journal | Journal of the American Society of Nephrology

HPI·MS Authors

Lili Chan

Kumardeep Chaudhary

Aparna Saha

Akhil Vaid

Kumardeep Chaudhary

Shan Zhao

Ishan Paranjpe

Sulaiman Somani

Riccardo Miotto

Jagat Narula

Zahi Fayad

Alex Charney

Erwin Bottinger

Benjamin Glicksberg

Girish Nadkarni

15 HPI•MS authors

Full list of authors

Lili Chan, Kumardeep Chaudhary, Aparna Saha, Kinsuk Chauhan, Akhil Vaid, Shan Zhao, Ishan Paranjpe, Sulaiman Somani, Felix Richter, Riccardo Miotto, Anuradha Lala, Arash Kia, Prem Timsina, Li Li, Robert Freeman, Rong Chen, Jagat Narula, Allan C. Just, Carol Horowitz, Zahi Fayad, Carlos Cordon-Cardo, Eric Schadt, Matthew A. Levin, David L. Reich, Valentin Fuster, Barbara Murphy, John C. He, Alexander W. Charney, Erwin P. Böttinger, Benjamin S. Glicksberg, Steven G. Coca, Girish N. Nadkarni and on behalf of the Mount Sinai COVID Informatics Center (MSCIC)

Journal

Journal of the American Society of Nephrology

Open Publication

August, 2020

Characterization of Patients Who Return to Hospital Following Discharge from Hospitalization For COVID-19

Journal | Journal of General Internal Medicine

HPI·MS Authors

Sulaiman Somani

Jessica De Freitas

Nidhi Naik

Erwin Bottinger

Zahi Fayad

Alex Charney

Shan Zhao

Benjamin Glicksberg

Girish Nadkarni

9 HPI•MS authors

Full list of authors

Sulaiman Somani, Felix Richter, Valentin Fuster, Jessica De Freitas, Nidhi Naik, Keith Sigel, Mount Sinai Covid Informatics Center, Erwin P Boettinger, Matthew A Levin, Zahi Fayad, Allan C Just, Alexander Charney, Shan Zhao, Benjamin S Glicksberg, Anuradha Lala, Girish Nadkarni

Journal

Journal of General Internal Medicine

Open Publication

August, 2020

Federated Learning of Electronic Health Records Improves Mortality Prediction in Patients Hospitalized with COVID-19

Journal | medRxiv

HPI·MS Authors

Akhil Vaid

Suraj Jaladanki

Shelly Teng

Arvind Kumar

Samuel Lee

Sulaiman Somani

Ishan Paranjpe

Jessica De Freitas

Tingyi Wanyan

Kipp Johnson

Mesude Bicak

Shan Zhao

Riccardo Miotto

Alex Charney

Erwin Bottinger

Zahi Fayad

Girish Nadkarni

Benjamin Glicksberg

18 HPI•MS authors

Full list of authors

Akhil Vaid, Suraj K Jaladanki, Jie Xu, Shelly Teng, Arvind Kumar, Samuel Lee, Sulaiman Somani, Ishan Paranjpe, Jessica K De Freitas, Tingyi Wanyan, Kipp W Johnson, Mesude Bicak, Eyal Klang, Young Joon Kwon, Anthony Costa, Shan Zhao, Riccardo Miotto, Alexander W Charney, Erwin Böttinger, Zahi A Fayad, Girish N Nadkarni, Fei Wang, Benjamin S Glicksberg

Journal

medRxiv

Open Publication

August, 2020

Sex Differences in Age and Comorbidities for COVID-19 Mortality in Urban New York City

Journal | SN Comprehensive Clinical Medicine

HPI·MS Authors

Girish Nadkarni

Benjamin Glicksberg

2 HPI•MS authors

Full list of authors

Eyal Klang, Shelly Soffer, Girish Nadkarni, Ben Glicksberg, Robert Freeman, Carol Horowitz, David L Reich, Matthew A Levin

Journal

SN Comprehensive Clinical Medicine

Open Publication

August, 2020

Prevalence and Impact of Myocardial Injury in Patients Hospitalized With COVID-19 Infection

Journal | Journal of the American College of Cardiology

HPI·MS Authors

Kipp Johnson

Adam Russak

Ishan Paranjpe

Shan Zhao

Sulaiman Somani

Akhil Vaid

Jessica De Freitas

Zahi Fayad

Alex Charney

Jagat Narula

Benjamin Glicksberg

Girish Nadkarni

12 HPI•MS authors

Full list of authors

Anuradha Lala, Kipp W Johnson, James L Januzzi, Adam J Russak, Ishan Paranjpe, Felix Richter, Shan Zhao, Sulaiman Somani, Tielman Van Vleck, Akhil Vaid, Fayzan Chaudhry, Jessica K De Freitas, Zahi A Fayad, Sean P Pinney, Matthew Levin, Alexander Charney, Emilia Bagiella, Jagat Narula, Benjamin S Glicksberg, Girish Nadkarni, Donna M Mancini, Valentin Fuster, Mount Sinai Covid Informatics Center

Journal

Journal of the American College of Cardiology

Open Publication

July, 2020

Sampling the Host Response to SARS-CoV-2 in Hospitals Under Siege

Journal | Nature Medicine

HPI·MS Authors

Alex Charney

Akhil Vaid

Benjamin Glicksberg

Girish Nadkarni

4 HPI•MS authors

Full list of authors

Alexander W. Charney, Nicole W. Simons, Konstantinos Mouskas, Lauren Lepow, Esther Cheng, Jessica Le Berichel, Christie Chang, Robert Marvin, Diane Marie Del Valle, Sharlene Calorossi, Alona Lansky, Laura Walker, Manishkumar Patel, Hui Xie, Nancy Yi, Alex Yu, Gurpawan Kang, Lora E. Liharska, Emily Moya, Matthew Hartnett, Sandra Hatem, Lillian Wilkins, Melody Eaton, Hajra Jamal, Kevin Tuballes, Steven T. Chen, Jonathan Chung, Jocelyn Harris, Craig Batchelor, Jose Lacunza, Mahlet Yishak, Kimberly Argueta, Neha Karekar, Brian Lee, Geoffrey Kelly, Daniel Geanon, Diana Handler, John Leech, Hiyab Stefanos, Travis Dawson, Ieisha Scott, Nancy Francoeur, Jessica S. Johnson, Akhil Vaid, Benjamin S. Glicksberg, Girish N. Nadkarni, Eric E. Schadt, Bruce D. Gelb, Adeeb Rahman, Robert Sebra, Glenn Martin, The Mount Sinai COVID-19 Biobank Team, Thomas Marron, Noam Beckmann, Seunghee Kim-Schulze, Sacha Gnjatic & Miriam Merad

Journal

Nature Medicine

Open Publication

July, 2020

Deep Representation Learning of Electronic Health Record to Unlock Patient Stratification at Scale

Journal | npj Digital Medicine volume

HPI·MS Authors

Benjamin Glicksberg

Matteo Danieletto

Riccardo Miotto

3 HPI•MS authors

Full list of authors

Isotta Landi, Benjamin S. Glicksberg, Hao-Chih Lee, Sarah Cherng, Giulia Landi, Matteo Danieletto, Joel T Dudley, Ceseare Furlanello, Riccardo Miotto

Journal

npj Digital Medicine volume

Open Publication

July, 2020

Association of Treatment Dose Anticoagulation with In-Hospital Survival Among Hospitalized Patients with COVID-19

Journal | Journal of the American College of Cardiology

HPI·MS Authors

Ishan Paranjpe

Benjamin Glicksberg

Alex Charney

Jagat Narula

Zahi Fayad

Shan Zhao

Girish Nadkarni

7 HPI•MS authors

Full list of authors

Ishan Paranjpe, Valentin Fuster, Anuradha Lala, Adam Russak, Benjamin S Glicksberg, Matthew A Levin , Alexander W Charney, Jagat Narula, Zahi A Fayad, Emilia Bagiella, Shan Zhao, Girish N Nadkarni

Journal

Journal of the American College of Cardiology

Open Publication

July, 2020

Activation of Cytotoxic T Cell Population and Inversion of CD4: CD8 Ration as Manifestations of Cellular Immune Response in SARS-COV-2 Infection

Journal | Journal of Hematopathology

HPI·MS Authors

Benjamin Glicksberg

Girish Nadkarni

2 HPI•MS authors

Full list of authors

Fahad Khan, Tayler van den Akker, Shafinaz Hussein, Bridget K Marcellino, Pallavi Khattar, Benjamin S Glicksberg, Girish N Nadkarni, Adolfo Firpo-Betancourt, Siraj M El Jamal

Journal

Journal of Hematopathology

Open Publication

July, 2020

Sepsis In The Era of Data-Driven Medicine: Personalizing Risks, Diagnoses, Treatments, and Prognoses

Journal | Briefings in Bioinformatics

HPI·MS Authors

Kipp Johnson

Benjamin Glicksberg

2 HPI•MS authors

Full list of authors

Andrew C Liu, Krishna Patel, Ramya Dhatri Vunikili, Kipp W Johnson, Fahad Abdu, Shivani Kamath Belman, Benjamin S Glicksberg, Pratyush Tandale, Roberto Fontanez, Oommen K Mathew, Andrew Kasarskis, Priyabrata Mukherjee, Lakshminarayanan Subramanian, Joel T Dudley, Khader Shameer

Journal

Briefings in Bioinformatics

Open Publication

June, 2020

Coronavirus 2019 and People Living With Human Immunodeficiency Virus: Outcomes for Hospitalized Patients in New York City

Journal | Clinical Infectious Diseases

HPI·MS Authors

Eddye Golden

Ishan Paranjpe

Sulaiman Somani

Jessica De Freitas

Riccardo Miotto

Shan Zhao

Erwin Bottinger

Zahi Fayad

Alex Charney

Girish Nadkarni

Benjamin Glicksberg

11 HPI•MS authors

Full list of authors

Keith Sigel, Talia Swartz, Eddye Golden, Ishan Paranjpe, Sulaiman Somani, Felix Richter, Jessica K De Freitas, Riccardo Miotto, Shan Zhao, Paz Polak, Tinaye Mutetwa, Stephanie Factor, Saurabh Mehandru, Michael Mullen, Francesca Cossarini, Erwin Bottinger, Zahi Fayad, Miriam Merad, Sacha Gnjatic, Judith Aberg, Alexander Charney, Girish Nadkarni, Benjamin S Glicksberg

Journal

Clinical Infectious Diseases

Open Publication

June, 2020

Derivation and Validation of Genome Wide Polygenic Score for Urinary Tract Stone Diagnosis

Journal | Kidney International

HPI·MS Authors

Girish Nadkarni

Benjamin Glicksberg

Ishan Paranjpe

Kumardeep Chaudhary

Ross O’Hagan

Arjun Kapoor

Suraj Jaladanki

Akhil Vaid

8 HPI•MS authors

Full list of authors

Ishan Paranjpe, Noah Tsao, Renae Judy, Manish Paranjpe, Kumardeep Chaudhary, Iain Forrest, Ross O’Hagan, Arjun Kapoor, John Pfail, Suraj Jaladanki, Fayzan Chaudhry, Akhil Vaid, Phan Q. Duy, CBIPM Genomics Team, Regeneron Genomics Team, John Cijiang He, Benjamin S Glicksberg, Steven G Coca, Mantu Gupta, Ron Do, Scott M. Damrauer, Girish N. Nadkarni

Journal

Kidney International

Open Publication

June, 2020

SARS-CoV-2 Viral Load Predicts COVID-19 Mortality

Journal | The Lancet

HPI·MS Authors

Shan Zhao

Girish Nadkarni

Benjamin Glicksberg

3 HPI•MS authors

Full list of authors

Elisabet Pujadas, Fayzan Chaudhry, Russell McBride, Felix Richter, Shan Zhao, Ania Wajnberg, Girish Nadkarni, Benjamin S Glicksberg, Jane Houldsworth, Carlos Cordon-Cardo

Journal

The Lancet

Open Publication

June, 2020

Identification of Therapeutic Targets from Genetic Association Studies Using Hierarchical Components Analysis

Journal | BioData Mining

HPI·MS Authors

Benjamin Glicksberg

1 HPI•MS authors

Full list of authors

Hao-Chih Lee, Osamu Ichikawa, Benjamin S Glicksberg, Aparna A Divaraniya, Christine E Becker, Pankaj Agarwal, Joel T Dudley

Journal

BioData Mining

Open Publication

June, 2020

Containment of Future Waves of COVID-19: Simulating the Impact of Different Policies and Testing Capacities for Contact Tracing, Testing, and Isolation

Journal | medRxiv

HPI·MS Authors

Benjamin Glicksberg

1 HPI•MS authors

Full list of authors

Vincenzo G Fiore, Nicholas DeFelice, Benjamin S Glicksberg, Ofer Perl, Anastasia Shuster, Kaustubh Kulkarni, Madeline O’Brien, M Andrea Pisauro, Dongil Chung, Xiaosi Gu

Journal

medRxiv

Open Publication

June, 2020

Machine Learning in Cardiology- Ensuring Clinical Impact Lives Up to the Hype

Journal | Journal of Cardiovascular Pharmacology and Therapeutics

HPI·MS Authors

Adam Russak

Jessica De Freitas

Ishan Paranjpe

Akhil Vaid

Shan Zhao

Sulaiman Somani

Riccardo Miotto

Girish Nadkarni

Kipp Johnson

Benjamin Glicksberg

10 HPI•MS authors

Full list of authors

Adam J Russak, Farhan Chaudhry, Jessica K De Freitas, Garrett Baron, Fayzan F Chaudhry, Solomon Bienstock, Ishan Paranjpe, Akhil Vaid, Mohsin Ali, Shan Zhao, Sulaiman Somani, Felix Richter, Tejeshwar Bawa, Phillip D Levy, Riccardo Miotto, Girish N Nadkarni, Kipp W Johnson, Benjamin S Glicksberg

Journal

Journal of Cardiovascular Pharmacology and Therapeutics

Open Publication

April, 2020

Clinical Characteristics of Hospitalized COVID-19 Patients in New York City

Journal | medRxiv

HPI·MS Authors

Ishan Paranjpe

Adam Russak

Jessica De Freitas

Riccardo Miotto

Akhil Vaid

Kipp Johnson

Matteo Danieletto

Eddye Golden

Manbir Singh

Sulaiman Somani

Arjun Kapoor

Ross O’Hagan

Patricia (Savi) Glowe

Zahi Fayad

Jagat Narula

Erwin Bottinger

Alex Charney

Benjamin Glicksberg

Girish Nadkarni

19 HPI•MS authors

Full list of authors

Ishan Paranjpe, Adam Russak, Jessica K De Freitas, Anuradha Lala, Riccardo Miotto, Akhil Vaid, Kipp W Johnson, Matteo Danieletto, Eddye Golden, Dara Meyer, Manbir Singh, Sulaiman Somani, Sayan Manna, Udit Nangia, Arjun Kapoor, Ross O'Hagan, Paul F O'Reilly, Laura M Huckins, Patricia Glowe, Arash Kia, Prem Timsina, Robert M Freeman, Matthew A Levin, Jeffrey Jhang, Adolfo Firpo, Patricia Kovatch, Joseph Finkelstein, Judith A Aberg, Emilia Bagiella, Carol R Horowitz, Barbara Murphy, Zahi A Fayad, Jagat Narula, Eric J Nestler, Valentin Fuster, Carlos Cordon-Cardo, Dennis S Charney, David L Reich, Allan C Just, Erwin P Bottinger, Alexander W Charney, Benjamin S Glicksberg, Girish Nadkarni, Mount Sinai Covid Informatics Center

Journal

medRxiv

Open Publication

April, 2020

Sex-Specific Cross Tissue Meta-Analysis Identifies Immune Dysregulation in Women with Alzheimer's Disease

Journal | bioRxiv

HPI·MS Authors

Benjamin Glicksberg

Ishan Paranjpe

2 HPI•MS authors

Full list of authors

Manish D Paranjpe, Stella Belonwu, Jason K Wang, Tomiko Oskotsky, Aarzu Gupta, Alice Taubes, Kelly Zalocusky, Ishan Paranjpe, Benjamin S Glicksberg, Yadong Huang, Marina Sirota

Journal

bioRxiv

Open Publication

April, 2020

Protected Health Information Filter (Philter): Accurately and Securely De-Identifying Free- Text Clinical Notes

Journal | NPJ Digital Medicine

HPI·MS Authors

Benjamin Glicksberg

1 HPI•MS authors

Full list of authors

Beau Norgeot, Kathleen Muenzen, Thomas A Peterson, Xuancheng Fan, Benjamin S Glicksberg, Gundolf Schenk, Eugenia Rutenberg, Boris Oskotsky, Marina Sirota, Jinoos Yazdany, Gabriela Schmajuk, Dana Ludwig, Theodore Goldstein, Atul J Butte

Journal

NPJ Digital Medicine

Open Publication

March, 2020

Accuracy of Medical Billing Data Against the Electronic Health Record in the Measurement of Colorectal Cancer Screening Rates

Journal | BMJ Open Quality

HPI·MS Authors

Benjamin Glicksberg

1 HPI•MS authors

Full list of authors

Vivek A. Rudrapatna, Benjamin S. Glicksberg, Patrick Avila, Emily Harding-Theobald, Connie Wang, Atul J. Butte

Journal

BMJ Open Quality

Open Publication

March, 2020

Blockchain-Authenticated Sharing of Cancer Patient Genomic and Clinical Outcomes Data With Cancer: A Prospective Cohort Study

Journal | Journal of Medical Internet Research

HPI·MS Authors

Benjamin Glicksberg

1 HPI•MS authors

Full list of authors

Benjamin S. Glicksberg, Shohei Burns, Rob Currie, Ann Griffin, Zhen Wang, David Haussler, Theodore Goldstein, Eric A. Collisson

Journal

Journal of Medical Internet Research

Open Publication

March, 2020

Association of Apolipoprotein L1 Risk Genotype and Air Pollution for Kidney Disease

Journal | Clinical Journal of American Society of Nephrology

HPI·MS Authors

Ishan Paranjpe

Kumardeep Chaudhary

Ross O’Hagan

Suraj Jaladanki

Arjun Kapoor

Benjamin Glicksberg

Erwin Bottinger

Girish Nadkarni

8 HPI•MS authors

Full list of authors

Ishan Paranjpe, Kumardeep Chaudhary, Manish Paranjpe, Ross O’Hagan, Sayan Manna, Suraj Jaladanki, Arjun Kapoor, Carol Horowitz, Nicholas Defelice, Rachel Jia, Benjamin Glicksberg, Richard Cooper, Erwin P Bottinger, Allan C. Just, Girish N. Nadkarni

Journal

Clinical Journal of American Society of Nephrology

Open Publication

February, 2020

Sleep In The Natural Environment: A Pilot Study

Journal | Sensors

HPI·MS Authors

Matteo Danieletto

Eddye Golden

Jessica De Freitas

Ishan Paranjpe

Girish Nadkarni

Riccardo Miotto

Patricia (Savi) Glowe

Benjamin Glicksberg

8 HPI•MS authors

Full list of authors

Fayzan F Chaudhry, Matteo Danieletto, Eddye Golden, Jerome Scelza, Greg Botwin, Mark Shervey, Jessica K. De Freitas, Ishan Paranjpe, Girish N. Nadkarni, Riccardo Miotto, Patricia Glowe, Greg Stock, Bethany Percha, Noah Zimmerman, Joel T. Dudley, Benjamin S. Glicksberg

Journal

Sensors

Open Publication

February, 2020

Identifying Acute Low Back Pain Episodes in Primary Care Practice from Clinical Notes: Observational Study

Journal | JMIR Medical Informatics

HPI·MS Authors

Riccardo Miotto

Benjamin Glicksberg

2 HPI•MS authors

Full list of authors

Riccardo Miotto, Bethany L Percha, Benjamin S Glicksberg, Hao-Chih Lee, Lisanne Cruz, Joel T Dudley, Ismail Nabeel

Journal

JMIR Medical Informatics

Open Publication

November, 2019

Correction to: Integrative Analysis of Loss-of-Function Variants in Clinical and Genomic Data Reveals Novel Genes Associated with Cardiovascular Traits

Journal | BMC Medical Genomics

HPI·MS Authors

Kipp Johnson

Benjamin Glicksberg

2 HPI•MS authors

Full list of authors

Benjamin S Glicksberg, Letizia Amadori, Nicholas K Akers, Katyayani Sukhavasi, Oscar Franzén, Li Li, Gillian M Belbin, Kristin L Ayers, Khader Shameer, Marcus A Badgeley, Kipp W Johnson, Ben Readhead, Bruce J Darrow, Eimear E Kenny, Christer Betsholtz, Raili Ermel, Josefin Skogsberg, Arno Ruusalepp, Eric E Schadt, Joel T Dudley, Hongxia Ren, Jason C Kovacic, Chiara Giannarelli, Shuyu D Li, Johan LM Björkegren, Rong Chen

Journal

BMC Medical Genomics

Open Publication

November, 2019

PatientExploreR: An Extensible Application for Dynamic Visualization of Patient Clinical History from Electronic Health Records in the OMOP Common Data Model

Journal | Bioinformatics

HPI·MS Authors

Benjamin Glicksberg

Kipp Johnson

Riccardo Miotto

3 HPI•MS authors

Full list of authors

Benjamin S Glicksberg, Boris Oskotsky, Phyllis M Thangaraj, Nicholas Giangreco, Marcus A Badgeley, Kipp W Johnson, Debajyoti Datta, Vivek A Rudrapatna, Nadav Rappoport, Mark M Shervey, Riccardo Miotto, Theodore C Goldstein, Eugenia Rutenberg, Remi Frazier, Nelson Lee, Sharat Israni, Rick Larsen, Bethany Percha, Li Li, Joel T Dudley, Nicholas P Tatonetti, Atul J Butte

Journal

Bioinformatics

Open Publication

September, 2019

Towards a fine-scale population health monitoring system

Journal | bioRxiv

HPI·MS Authors

Benjamin Glicksberg

Erwin Bottinger

2 HPI•MS authors

Full list of authors

Gillian M Belbin, Stephane Wenric, Sinead Cullina, Benjamin S Glicksberg, Arden Moscati, Genevieve L Wojcik, Ruhollah Shemirani, Noam D Beckmann, Ariella Cohain, Elena P Sorokin, Danny S Park, Jose-Luis Ambite, Steve Ellis, Adam Auton, CBIPM Genomics Team, CBIPM Genomics Team, Regeneron Genetics Center, Erwin P. Bottinger, Judy H Cho, Ruth JF Loos, Noura S Abul-husn, Noah A Zaitlen, Christopher R Gignoux, Eimear E Kenny

Journal

bioRxiv

Open Publication